HL_6NUO_099

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CGAGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NUO_099 not in the Motif Atlas

Geometric match to HL_4V9F_066

Geometric discrepancy: 0.0868

The information below is about HL_4V9F_066

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

6NUO|1|RA|C|2670
6NUO|1|RA|G|2671
6NUO|1|RA|A|2672
6NUO|1|RA|G|2673
6NUO|1|RA|A|2674
6NUO|1|RA|G|2675

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RH

50S ribosomal protein L6