HL_6NUO_103

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GAAGACCAC

Length

9 nucleotides

Bulged bases

6NUO|1|RA|A|2830

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NUO_103 not in the Motif Atlas

Homologous match to HL_7RQB_068

Geometric discrepancy: 0.0723

The information below is about HL_7RQB_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.1

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

6NUO|1|RA|G|2829
6NUO|1|RA|A|2830
6NUO|1|RA|A|2831
6NUO|1|RA|G|2832
6NUO|1|RA|A|2833
6NUO|1|RA|C|2834
6NUO|1|RA|C|2835
6NUO|1|RA|A|2836
6NUO|1|RA|C|2837

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RE

50S ribosomal protein L3

Chain RR

50S ribosomal protein L17