HL_6NUO_114

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CACUGAGACACGGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NUO_114 not in the Motif Atlas

Homologous match to HL_4LFB_008

Geometric discrepancy: 0.0963

The information below is about HL_4LFB_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.3

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

6NUO|1|XA|C|320
6NUO|1|XA|A|321
6NUO|1|XA|C|322
6NUO|1|XA|U|323
6NUO|1|XA|G|324
6NUO|1|XA|A|325
6NUO|1|XA|G|326
6NUO|1|XA|A|327
6NUO|1|XA|C|328
6NUO|1|XA|A|329
6NUO|1|XA|C|330
6NUO|1|XA|G|331
6NUO|1|XA|G|332
6NUO|1|XA|G|333

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XP

30S ribosomal protein S16

Chain XT

30S ribosomal protein S20