HL_6NUO_154

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GUUCGUGGAGC

Length

11 nucleotides

Bulged bases

6NUO|1|YA|G|413

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NUO_154 not in the Motif Atlas

Homologous match to HL_7RQB_013

Geometric discrepancy: 0.0947

The information below is about HL_7RQB_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.4

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

6NUO|1|YA|G|409
6NUO|1|YA|U|410
6NUO|1|YA|U|411
6NUO|1|YA|C|412
6NUO|1|YA|G|413
6NUO|1|YA|U|414
6NUO|1|YA|G|415
6NUO|1|YA|G|416
6NUO|1|YA|A|417
6NUO|1|YA|G|418
6NUO|1|YA|C|419

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y1

50S ribosomal protein L28

Chain YP

50S ribosomal protein L15