HL_6NUO_166

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

UGAAAAG

Length

7 nucleotides

Bulged bases

6NUO|1|YA|A|828, 6NUO|1|YA|A|831

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NUO_166 not in the Motif Atlas

Homologous match to HL_7A0S_023

Geometric discrepancy: 0.14

The information below is about HL_7A0S_023

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_53890.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

15

Unit IDs

6NUO|1|YA|U|826
6NUO|1|YA|G|827
6NUO|1|YA|A|828
6NUO|1|YA|A|829
6NUO|1|YA|A|830
6NUO|1|YA|A|831
6NUO|1|YA|G|832

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YD

50S ribosomal protein L2