HL_6NUO_168

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CCCACCAG

Length

8 nucleotides

Bulged bases

6NUO|1|YA|C|932, 6NUO|1|YA|C|935

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NUO_168 not in the Motif Atlas

Homologous match to HL_5J7L_158

Geometric discrepancy: 0.5966

The information below is about HL_5J7L_158

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NUO|1|YA|C|931
6NUO|1|YA|C|932
6NUO|1|YA|C|933
6NUO|1|YA|A|934
6NUO|1|YA|C|935
6NUO|1|YA|C|936
6NUO|1|YA|A|937
6NUO|1|YA|G|938

Current chains

Chain YA

23S rRNA

Nearby chains

Chain XM

30S ribosomal protein S13

Chain XS

30S ribosomal protein S19