HL_6NUO_178

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

6NUO|1|YA|U|1442, 6NUO|1|YA|U|1443

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NUO_178 not in the Motif Atlas

Homologous match to HL_7RQB_036

Geometric discrepancy: 0.0964

The information below is about HL_7RQB_036

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69023.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

6NUO|1|YA|G|1435
6NUO|1|YA|U|1436
6NUO|1|YA|U|1437
6NUO|1|YA|A|1438
6NUO|1|YA|A|1439
6NUO|1|YA|U|1440
6NUO|1|YA|A|1441
6NUO|1|YA|U|1442
6NUO|1|YA|U|1443
6NUO|1|YA|C|1444

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YX

50S ribosomal protein L23