HL_6NUO_192

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GGUAAGUUC

Length

9 nucleotides

Bulged bases

6NUO|1|YA|U|1977

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NUO_192 not in the Motif Atlas

Homologous match to HL_7RQB_049

Geometric discrepancy: 0.1809

The information below is about HL_7RQB_049

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_51824.1

Basepair signature

cWW-F-F-tSH-F-F

Number of instances in this motif group

8

Unit IDs

6NUO|1|YA|G|1971
6NUO|1|YA|G|1972
6NUO|1|YA|U|1973
6NUO|1|YA|A|1974
6NUO|1|YA|A|1975
6NUO|1|YA|G|1976
6NUO|1|YA|U|1977
6NUO|1|YA|U|1978
6NUO|1|YA|C|1979

Current chains

Chain YA

23S rRNA

Nearby chains

Chain XA

Small subunit ribosomal RNA; SSU rRNA

Chain YO

50S ribosomal protein L14