HL_6NUO_194

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CUCCGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NUO_194 not in the Motif Atlas

Homologous match to HL_3U4M_001

Geometric discrepancy: 0.4341

The information below is about HL_3U4M_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

6NUO|1|YA|C|2165
6NUO|1|YA|U|2166
6NUO|1|YA|C|2167
6NUO|1|YA|C|2168
6NUO|1|YA|G|2169
6NUO|1|YA|G|2170

Current chains

Chain YA

23S rRNA

Nearby chains

Chain QA

Small subunit ribosomal RNA; SSU rRNA