3D structure

PDB id
6NUO (explore in PDB, NAKB, or RNA 3D Hub)
Description
Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
CGUCCACAG
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6NUO_203 not in the Motif Atlas
Homologous match to HL_5J7L_193
Geometric discrepancy: 0.128
The information below is about HL_5J7L_193
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_32735.2
Basepair signature
cWW-tSH-F-F-F-F-F
Number of instances in this motif group
7

Unit IDs

6NUO|1|YA|C|2483
6NUO|1|YA|G|2484
6NUO|1|YA|U|2485
6NUO|1|YA|C|2486
6NUO|1|YA|C|2487
6NUO|1|YA|A|2488
6NUO|1|YA|C|2489
6NUO|1|YA|A|2490
6NUO|1|YA|G|2491

Current chains

Chain YA
23S rRNA

Nearby chains

Chain Y9
50S ribosomal protein L36
Chain YH
50S ribosomal protein L6

Coloring options:


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