HL_6NUO_219

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CCCUUGGG

Length

8 nucleotides

Bulged bases

6NUO|1|XA|U|188, 6NUO|1|XA|U|189, 6NUO|1|XA|G|190

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NUO_219 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.3332

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33487.1

Basepair signature

cWW-cWW

Number of instances in this motif group

2

Unit IDs

6NUO|1|XA|C|186|||F
6NUO|1|XA|C|186|||G
6NUO|1|XA|C|187
6NUO|1|XA|U|188
6NUO|1|XA|U|189
6NUO|1|XA|G|190
6NUO|1|XA|G|191|||A
6NUO|1|XA|G|191|||B

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XQ

30S ribosomal protein S17

Chain XT

30S ribosomal protein S20