HL_6NWY_087
3D structure
- PDB id
- 6NWY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Modified tRNA(Pro) bound to Thermus thermophilus 70S (near-cognate)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- GUGAAGAUGC
- Length
- 10 nucleotides
- Bulged bases
- 6NWY|1|RA|A|2030, 6NWY|1|RA|A|2031, 6NWY|1|RA|G|2032
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6NWY_087 not in the Motif Atlas
- Homologous match to HL_7RQB_050
- Geometric discrepancy: 0.0959
- The information below is about HL_7RQB_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_90642.6
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
6NWY|1|RA|G|2027
6NWY|1|RA|U|2028
6NWY|1|RA|G|2029
6NWY|1|RA|A|2030
6NWY|1|RA|A|2031
6NWY|1|RA|G|2032
6NWY|1|RA|A|2033
6NWY|1|RA|U|2034
6NWY|1|RA|G|2035
6NWY|1|RA|C|2036
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain R5
- 50S ribosomal protein L32
- Chain RE
- 50S ribosomal protein L3
- Chain RV
- 50S ribosomal protein L21
Coloring options: