HL_6NWY_200
3D structure
- PDB id
- 6NWY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Modified tRNA(Pro) bound to Thermus thermophilus 70S (near-cognate)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- CGCAAGGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6NWY_200 not in the Motif Atlas
- Homologous match to HL_7A0S_055
- Geometric discrepancy: 0.1875
- The information below is about HL_7A0S_055
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_93324.4
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 24
Unit IDs
6NWY|1|YA|C|2324
6NWY|1|YA|G|2325
6NWY|1|YA|C|2326
6NWY|1|YA|A|2327
6NWY|1|YA|A|2328
6NWY|1|YA|G|2329
6NWY|1|YA|G|2330
6NWY|1|YA|G|2331
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain Y0
- 50S ribosomal protein L27
- Chain YG
- 50S ribosomal protein L5
- Chain YQ
- 50S ribosomal protein L16
- Chain YZ
- 50S ribosomal protein L25
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