3D structure

PDB id
6O3M (explore in PDB, NAKB, or RNA 3D Hub)
Description
Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)
Experimental method
X-RAY DIFFRACTION
Resolution
3.97 Å

Loop

Sequence
GCAAAUC
Length
7 nucleotides
Bulged bases
6O3M|1|RA|C|1493, 6O3M|1|RA|U|1497
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6O3M_073 not in the Motif Atlas
Homologous match to HL_7RQB_038
Geometric discrepancy: 0.1698
The information below is about HL_7RQB_038
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_46680.1
Basepair signature
cWW-F-F-F
Number of instances in this motif group
27

Unit IDs

6O3M|1|RA|G|1492
6O3M|1|RA|C|1493
6O3M|1|RA|A|1494
6O3M|1|RA|A|1495
6O3M|1|RA|A|1496
6O3M|1|RA|U|1497
6O3M|1|RA|C|1498

Current chains

Chain RA
23S rRNA

Nearby chains

Chain RD
50S ribosomal protein L2

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.336 s
Application loaded.