3D structure

PDB id
6O3M (explore in PDB, NAKB, or RNA 3D Hub)
Description
Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)
Experimental method
X-RAY DIFFRACTION
Resolution
3.97 Å

Loop

Sequence
GGUAAGUUC
Length
9 nucleotides
Bulged bases
6O3M|1|RA|U|1955
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6O3M_085 not in the Motif Atlas
Homologous match to HL_7A0S_048
Geometric discrepancy: 0.1771
The information below is about HL_7A0S_048
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_20167.2
Basepair signature
cWW-F-F-F-F-F-F
Number of instances in this motif group
10

Unit IDs

6O3M|1|RA|G|1949
6O3M|1|RA|G|1950
6O3M|1|RA|U|1951
6O3M|1|RA|A|1952
6O3M|1|RA|A|1953
6O3M|1|RA|G|1954
6O3M|1|RA|U|1955
6O3M|1|RA|U|1956
6O3M|1|RA|C|1957

Current chains

Chain RA
23S rRNA

Nearby chains

Chain QA
Small subunit ribosomal RNA; SSU rRNA
Chain RO
50S ribosomal protein L14

Coloring options:


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