HL_6O3M_215

3D structure

PDB id

6O3M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.97 Å

Loop

Sequence

GGGAAACU

Length

8 nucleotides

Bulged bases

6O3M|1|QA|A|162

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O3M_215 not in the Motif Atlas

Homologous match to HL_6CZR_215

Geometric discrepancy: 0.3724

The information below is about HL_6CZR_215

Detailed Annotation

GNRA with near cWW

Broad Annotation

GNRA with near cWW

Motif group

HL_82182.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

21

Unit IDs

6O3M|1|QA|G|157
6O3M|1|QA|G|158
6O3M|1|QA|G|159
6O3M|1|QA|A|160
6O3M|1|QA|A|161
6O3M|1|QA|A|162
6O3M|1|QA|C|163
6O3M|1|QA|U|164

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QT

30S ribosomal protein S20