HL_6O8W_013
3D structure
- PDB id
- 6O8W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.53 Å
Loop
- Sequence
- AACACGAGAAAUU
- Length
- 13 nucleotides
- Bulged bases
- 6O8W|1|A|G|426
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6O8W_013 not in the Motif Atlas
- Homologous match to HL_4WF9_013
- Geometric discrepancy: 0.5892
- The information below is about HL_4WF9_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69139.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
6O8W|1|A|A|421
6O8W|1|A|A|422
6O8W|1|A|C|423
6O8W|1|A|A|424
6O8W|1|A|C|425
6O8W|1|A|G|426
6O8W|1|A|A|427
6O8W|1|A|G|428
6O8W|1|A|A|429
6O8W|1|A|A|430
6O8W|1|A|A|431
6O8W|1|A|U|432
6O8W|1|A|U|433
Current chains
- Chain A
- 50S subunit
Nearby chains
- Chain Y
- 50S ribosomal protein L28
- Chain u
- Transfer RNA; tRNA
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