HL_6O8W_052

3D structure

PDB id

6O8W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01

Experimental method

ELECTRON MICROSCOPY

Resolution

3.53 Å

Loop

Sequence

CUAAUCG

Length

7 nucleotides

Bulged bases

6O8W|1|A|A|2225, 6O8W|1|A|U|2227

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O8W_052 not in the Motif Atlas

Homologous match to HL_5J7L_185

Geometric discrepancy: 0.2499

The information below is about HL_5J7L_185

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_49922.4

Basepair signature

cWW-F-F-F

Number of instances in this motif group

10

Unit IDs

6O8W|1|A|C|2223
6O8W|1|A|U|2224
6O8W|1|A|A|2225
6O8W|1|A|A|2226
6O8W|1|A|U|2227
6O8W|1|A|C|2228
6O8W|1|A|G|2229

Current chains

Chain A

50S subunit

Nearby chains

Chain C

50S ribosomal protein L2