HL_6O8W_066

3D structure

PDB id

6O8W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01

Experimental method

ELECTRON MICROSCOPY

Resolution

3.53 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

6O8W|1|A|G|2765, 6O8W|1|A|C|2769

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O8W_066 not in the Motif Atlas

Homologous match to HL_5J7L_199

Geometric discrepancy: 0.1674

The information below is about HL_5J7L_199

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74055.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

6O8W|1|A|C|2759
6O8W|1|A|U|2760
6O8W|1|A|G|2761
6O8W|1|A|A|2762
6O8W|1|A|A|2763
6O8W|1|A|A|2764
6O8W|1|A|G|2765
6O8W|1|A|C|2766
6O8W|1|A|A|2767
6O8W|1|A|U|2768
6O8W|1|A|C|2769
6O8W|1|A|U|2770
6O8W|1|A|A|2771
6O8W|1|A|A|2772
6O8W|1|A|G|2773

Current chains

Chain A

50S subunit

Nearby chains

Chain 6

50S ribosomal protein L36

Chain G

50S ribosomal protein L6

Chain K

50S ribosomal protein L13