HL_6O8W_078
3D structure
- PDB id
- 6O8W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.53 Å
Loop
- Sequence
- CCUGAGAGGG
- Length
- 10 nucleotides
- Bulged bases
- 6O8W|1|a|C|310
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6O8W_078 not in the Motif Atlas
- Geometric match to HL_8C3A_022
- Geometric discrepancy: 0.2639
- The information below is about HL_8C3A_022
- Detailed Annotation
- Externally structured
- Broad Annotation
- Externally structured
- Motif group
- HL_96426.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 4
Unit IDs
6O8W|1|a|C|309
6O8W|1|a|C|310
6O8W|1|a|U|311
6O8W|1|a|G|312
6O8W|1|a|A|313
6O8W|1|a|G|314
6O8W|1|a|A|315
6O8W|1|a|G|316
6O8W|1|a|G|317
6O8W|1|a|G|318
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain d
- 30S ribosomal protein S4
- Chain e
- 30S ribosomal protein S5
- Chain l
- 30S ribosomal protein S12
- Chain q
- 30S ribosomal protein S17
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