HL_6O8W_094

3D structure

PDB id

6O8W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01

Experimental method

ELECTRON MICROSCOPY

Resolution

3.53 Å

Loop

Sequence

UUCGGG

Length

6 nucleotides

Bulged bases

6O8W|1|a|C|1047

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O8W_094 not in the Motif Atlas

Geometric match to HL_6U8D_003

Geometric discrepancy: 0.2001

The information below is about HL_6U8D_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32346.6

Basepair signature

cWW-F

Number of instances in this motif group

11

Unit IDs

6O8W|1|a|U|1045
6O8W|1|a|U|1046
6O8W|1|a|C|1047
6O8W|1|a|G|1048
6O8W|1|a|G|1049
6O8W|1|a|G|1050

Current chains

Chain a

16S rRNA

Nearby chains

Chain c

30S ribosomal protein S3