HL_6O8W_105
3D structure
- PDB id
- 6O8W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.53 Å
Loop
- Sequence
- GAUUGAAAAUC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6O8W_105 not in the Motif Atlas
- Homologous match to HL_4WSM_225
- Geometric discrepancy: 0.3694
- The information below is about HL_4WSM_225
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_14063.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
6O8W|1|u|G|30
6O8W|1|u|A|31
6O8W|1|u|U|32
6O8W|1|u|U|33
6O8W|1|u|G|34
6O8W|1|u|A|35
6O8W|1|u|A|36
6O8W|1|u|A|37
6O8W|1|u|A|38
6O8W|1|u|U|39
6O8W|1|u|C|40
Current chains
- Chain u
- tRNA
Nearby chains
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain i
- 30S ribosomal protein S9
- Chain k
- 30S ribosomal protein S11
- Chain v
- mRNA
Coloring options: