HL_6O8W_106
3D structure
- PDB id
- 6O8W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.53 Å
Loop
- Sequence
- GUUCGAUUC
- Length
- 9 nucleotides
- Bulged bases
- 6O8W|1|u|C|56, 6O8W|1|u|G|57
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6O8W_106 not in the Motif Atlas
- Homologous match to HL_4WT8_217
- Geometric discrepancy: 0.3076
- The information below is about HL_4WT8_217
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.3
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 135
Unit IDs
6O8W|1|u|G|53
6O8W|1|u|U|54
6O8W|1|u|U|55
6O8W|1|u|C|56
6O8W|1|u|G|57
6O8W|1|u|A|58
6O8W|1|u|U|59
6O8W|1|u|U|60
6O8W|1|u|C|61
Current chains
- Chain u
- tRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: