HL_6O8X_004

3D structure

PDB id

6O8X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class02

Experimental method

ELECTRON MICROSCOPY

Resolution

3.68 Å

Loop

Sequence

UUUUAUAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O8X_004 not in the Motif Atlas

Homologous match to HL_4WF9_004

Geometric discrepancy: 0.339

The information below is about HL_4WF9_004

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_98423.3

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

15

Unit IDs

6O8X|1|A|U|137
6O8X|1|A|U|138
6O8X|1|A|U|139
6O8X|1|A|U|140
6O8X|1|A|A|141
6O8X|1|A|U|142
6O8X|1|A|A|143
6O8X|1|A|G|144

Current chains

Chain A

23S rRNA

Nearby chains

Chain U

50S ribosomal protein L23