HL_6O8Z_019

3D structure

PDB id

6O8Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class04

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

CGAAGAG

Length

7 nucleotides

Bulged bases

6O8Z|1|A|A|652

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O8Z_019 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.2801

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40612.1

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

6O8Z|1|A|C|649
6O8Z|1|A|G|650
6O8Z|1|A|A|651
6O8Z|1|A|A|652
6O8Z|1|A|G|653
6O8Z|1|A|A|654
6O8Z|1|A|G|655

Current chains

Chain A

23S rRNA

Nearby chains

Chain E

50S ribosomal protein L4