HL_6O8Z_023
3D structure
- PDB id
- 6O8Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class04
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.49 Å
Loop
- Sequence
- CGUUGAAAAG
- Length
- 10 nucleotides
- Bulged bases
- 6O8Z|1|A|U|787, 6O8Z|1|A|A|791, 6O8Z|1|A|A|792
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6O8Z_023 not in the Motif Atlas
- Homologous match to HL_4WF9_023
- Geometric discrepancy: 0.1817
- The information below is about HL_4WF9_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50204.1
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 11
Unit IDs
6O8Z|1|A|C|784
6O8Z|1|A|G|785
6O8Z|1|A|U|786
6O8Z|1|A|U|787
6O8Z|1|A|G|788
6O8Z|1|A|A|789
6O8Z|1|A|A|790
6O8Z|1|A|A|791
6O8Z|1|A|A|792
6O8Z|1|A|G|793
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 2
- 50S ribosomal protein L32
- Chain 4
- 50S ribosomal protein L34
- Chain D
- 50S ribosomal protein L3
- Chain T
- 50S ribosomal protein L22
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