HL_6O90_059

3D structure

PDB id

6O90 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class05

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

CGCAUGGAAG

Length

10 nucleotides

Bulged bases

6O90|1|A|C|2420

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O90_059 not in the Motif Atlas

Homologous match to HL_4WF9_055

Geometric discrepancy: 0.142

The information below is about HL_4WF9_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_51853.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

6O90|1|A|C|2418
6O90|1|A|G|2419
6O90|1|A|C|2420
6O90|1|A|A|2421
6O90|1|A|U|2422
6O90|1|A|G|2423
6O90|1|A|G|2424
6O90|1|A|A|2425
6O90|1|A|A|2426
6O90|1|A|G|2427

Current chains

Chain A

23S rRNA

Nearby chains

Chain M

50S ribosomal protein L15