HL_6O9J_030

3D structure

PDB id

6O9J (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Elongation Competent Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

6O9J|1|B|A|1070

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O9J_030 not in the Motif Atlas

Homologous match to HL_6PRV_001

Geometric discrepancy: 0.0947

The information below is about HL_6PRV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6O9J|1|B|C|1064
6O9J|1|B|U|1065
6O9J|1|B|U|1066
6O9J|1|B|A|1067
6O9J|1|B|G|1068
6O9J|1|B|A|1069
6O9J|1|B|A|1070
6O9J|1|B|G|1071
6O9J|1|B|C|1072
6O9J|1|B|A|1073
6O9J|1|B|G|1074

Current chains

Chain B

23S rRNA

Nearby chains

Chain 6

50S ribosomal protein L11