HL_6O9J_031

3D structure

PDB id

6O9J (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Elongation Competent Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CGUAAUAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O9J_031 not in the Motif Atlas

Homologous match to HL_6PRV_002

Geometric discrepancy: 0.1017

The information below is about HL_6PRV_002

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

6O9J|1|B|C|1092
6O9J|1|B|G|1093
6O9J|1|B|U|1094
6O9J|1|B|A|1095
6O9J|1|B|A|1096
6O9J|1|B|U|1097
6O9J|1|B|A|1098
6O9J|1|B|G|1099

Current chains

Chain B

23S rRNA

Nearby chains

Chain 5

50S ribosomal protein L36

Chain 6

50S ribosomal protein L11

Chain G

50S ribosomal protein L6