HL_6O9J_053

3D structure

PDB id

6O9J (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Elongation Competent Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

ACGCCAGU

Length

8 nucleotides

Bulged bases

6O9J|1|B|C|2145

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O9J_053 not in the Motif Atlas

Geometric match to HL_8C3A_039

Geometric discrepancy: 0.3552

The information below is about HL_8C3A_039

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

6O9J|1|B|A|2142
6O9J|1|B|C|2143
6O9J|1|B|G|2144
6O9J|1|B|C|2145
6O9J|1|B|C|2146
6O9J|1|B|A|2147
6O9J|1|B|G|2148
6O9J|1|B|U|2149

Current chains

Chain B

23S rRNA

Nearby chains

Chain k

30S ribosomal protein S11