HL_6O9K_062

3D structure

PDB id

6O9K (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CUGUUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O9K_062 not in the Motif Atlas

Homologous match to HL_7A0S_061

Geometric discrepancy: 0.3071

The information below is about HL_7A0S_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

6O9K|1|A|C|2551
6O9K|1|A|U|2552
6O9K|1|A|G|2553
6O9K|1|A|U|2554
6O9K|1|A|U|2555
6O9K|1|A|C|2556
6O9K|1|A|G|2557

Current chains

Chain A

23S rRNA

Nearby chains