HL_6OF6_034
3D structure
- PDB id
- 6OF6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OF6_034 not in the Motif Atlas
- Homologous match to HL_6CFJ_107
- Geometric discrepancy: 0.0843
- The information below is about HL_6CFJ_107
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.6
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
6OF6|1|QV|G|31
6OF6|1|QV|C|32
6OF6|1|QV|U|33
6OF6|1|QV|C|34
6OF6|1|QV|A|35
6OF6|1|QV|U|36
6OF6|1|QV|A|37
6OF6|1|QV|A|38
6OF6|1|QV|C|39
Current chains
- Chain QV
- P-site tRNAfMet
Nearby chains
- Chain QA
- Small subunit ribosomal RNA; SSU rRNA
- Chain QI
- 30S ribosomal protein S9
- Chain QM
- 30S ribosomal protein S13
- Chain QW
- Transfer RNA; tRNA
- Chain QX
- mRNA
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