3D structure

PDB id
6OF6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
AGAAAU
Length
6 nucleotides
Bulged bases
6OF6|1|RA|A|229
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6OF6_048 not in the Motif Atlas
Homologous match to HL_7RQB_007
Geometric discrepancy: 0.2988
The information below is about HL_7RQB_007
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_02862.2
Basepair signature
cWW-F-F-F
Number of instances in this motif group
6

Unit IDs

6OF6|1|RA|A|225
6OF6|1|RA|G|226
6OF6|1|RA|A|227
6OF6|1|RA|A|228
6OF6|1|RA|A|229
6OF6|1|RA|U|230

Current chains

Chain RA
23S rRNA

Nearby chains

Chain RP
50S ribosomal protein L15

Coloring options:


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