HL_6OF6_048

3D structure

PDB id

6OF6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

AGAAAU

Length

6 nucleotides

Bulged bases

6OF6|1|RA|A|229

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OF6_048 not in the Motif Atlas

Homologous match to HL_7RQB_007

Geometric discrepancy: 0.2988

The information below is about HL_7RQB_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_02862.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

6

Unit IDs

6OF6|1|RA|A|225
6OF6|1|RA|G|226
6OF6|1|RA|A|227
6OF6|1|RA|A|228
6OF6|1|RA|A|229
6OF6|1|RA|U|230

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RP

50S ribosomal protein L15