HL_6OF6_071

3D structure

PDB id

6OF6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CGUAAUAG

Length

8 nucleotides

Bulged bases

6OF6|1|RA|A|1095

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OF6_071 not in the Motif Atlas

Geometric match to HL_3NDB_001

Geometric discrepancy: 0.3292

The information below is about HL_3NDB_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_57875.1

Basepair signature

cWW-F-F

Number of instances in this motif group

5

Unit IDs

6OF6|1|RA|C|1092
6OF6|1|RA|G|1093
6OF6|1|RA|U|1094
6OF6|1|RA|A|1095
6OF6|1|RA|A|1096
6OF6|1|RA|U|1097
6OF6|1|RA|A|1098
6OF6|1|RA|G|1099

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RH

50S ribosomal protein L6