3D structure

PDB id
6OF6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
UGAUGAG
Length
7 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6OF6_085 not in the Motif Atlas
Homologous match to HL_7RQB_043
Geometric discrepancy: 0.5176
The information below is about HL_7RQB_043
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_43656.2
Basepair signature
cWW-tSH
Number of instances in this motif group
8

Unit IDs

6OF6|1|RA|U|1727
6OF6|1|RA|G|1728
6OF6|1|RA|A|1729
6OF6|1|RA|U|1730
6OF6|1|RA|G|1731
6OF6|1|RA|A|1732
6OF6|1|RA|G|1733

Current chains

Chain RA
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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