HL_6OF6_149
3D structure
- PDB id
- 6OF6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CUCAGAAGGGAGAG
- Length
- 14 nucleotides
- Bulged bases
- 6OF6|1|XW|A|16, 6OF6|1|XW|A|17, 6OF6|1|XW|G|18, 6OF6|1|XW|G|19, 6OF6|1|XW|G|20
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OF6_149 not in the Motif Atlas
- Homologous match to HL_4V9I_038
- Geometric discrepancy: 0.3773
- The information below is about HL_4V9I_038
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_68572.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
6OF6|1|XW|C|11
6OF6|1|XW|U|12
6OF6|1|XW|C|13
6OF6|1|XW|A|14
6OF6|1|XW|G|15
6OF6|1|XW|A|16
6OF6|1|XW|A|17
6OF6|1|XW|G|18
6OF6|1|XW|G|19
6OF6|1|XW|G|20
6OF6|1|XW|A|21
6OF6|1|XW|G|22
6OF6|1|XW|A|23
6OF6|1|XW|G|24
Current chains
- Chain XW
- E-site tRNAAla(GGC)
Nearby chains
- Chain XK
- 30S ribosomal protein S11
- Chain YA
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: