HL_6OF6_152
3D structure
- PDB id
- 6OF6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- AUGGCAU
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OF6_152 not in the Motif Atlas
- Homologous match to HL_5L4O_002
- Geometric discrepancy: 0.5981
- The information below is about HL_5L4O_002
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- tRNA anticodon loop
- Motif group
- HL_82182.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 19
Unit IDs
6OF6|1|XY|A|32
6OF6|1|XY|U|33
6OF6|1|XY|G|34
6OF6|1|XY|G|35
6OF6|1|XY|C|36
6OF6|1|XY|A|37
6OF6|1|XY|U|38
Current chains
- Chain XY
- A-site tRNAAla(GGC)
Nearby chains
- Chain XA
- Small subunit ribosomal RNA; SSU rRNA
- Chain XL
- 30S ribosomal protein S12
- Chain XM
- 30S ribosomal protein S13
- Chain XX
- mRNA
- Chain YA
- Large subunit ribosomal RNA; LSU rRNA
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