HL_6OF6_172

3D structure

PDB id

6OF6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CGUUGAG

Length

7 nucleotides

Bulged bases

6OF6|1|YA|U|614, 6OF6|1|YA|G|615

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OF6_172 not in the Motif Atlas

Homologous match to HL_7A0S_019

Geometric discrepancy: 0.2925

The information below is about HL_7A0S_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47787.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

10

Unit IDs

6OF6|1|YA|C|611
6OF6|1|YA|G|612
6OF6|1|YA|U|613
6OF6|1|YA|U|614
6OF6|1|YA|G|615
6OF6|1|YA|A|616
6OF6|1|YA|G|617

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YF

50S ribosomal protein L4