3D structure

PDB id
6OF6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
GUGAGAAUC
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6OF6_186 not in the Motif Atlas
Homologous match to HL_7RQB_033
Geometric discrepancy: 0.0805
The information below is about HL_7RQB_033
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_41998.1
Basepair signature
cWW-tWH-F-F-F
Number of instances in this motif group
69

Unit IDs

6OF6|1|YA|G|1281
6OF6|1|YA|U|1282
6OF6|1|YA|G|1283
6OF6|1|YA|A|1284
6OF6|1|YA|G|1285
6OF6|1|YA|A|1286
6OF6|1|YA|A|1287
6OF6|1|YA|U|1288
6OF6|1|YA|C|1289

Current chains

Chain YA
23S rRNA

Nearby chains

Chain YR
50S ribosomal protein L17
Chain YW
50S ribosomal protein L22

Coloring options:


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