HL_6OF6_219

3D structure

PDB id

6OF6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CUCCAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OF6_219 not in the Motif Atlas

Homologous match to HL_7RQB_065

Geometric discrepancy: 0.1007

The information below is about HL_7RQB_065

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53171.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

18

Unit IDs

6OF6|1|YA|C|2701
6OF6|1|YA|U|2702
6OF6|1|YA|C|2703
6OF6|1|YA|C|2704
6OF6|1|YA|A|2705
6OF6|1|YA|G|2706

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YR

50S ribosomal protein L17