HL_6OFX_018
3D structure
- PDB id
- 6OFX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Non-rotated ribosome (Structure I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GGAAAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OFX_018 not in the Motif Atlas
- Homologous match to HL_5J7L_152
- Geometric discrepancy: 0.1042
- The information below is about HL_5J7L_152
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.7
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 349
Unit IDs
6OFX|1|1|G|629
6OFX|1|1|G|630
6OFX|1|1|A|631
6OFX|1|1|A|632
6OFX|1|1|A|633
6OFX|1|1|C|634
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain E
- 50S ribosomal protein L35
- Chain l
- 50S ribosomal protein L15
Coloring options: