HL_6OFX_088
3D structure
- PDB id
- 6OFX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Non-rotated ribosome (Structure I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CCUUGAG
- Length
- 7 nucleotides
- Bulged bases
- 6OFX|1|3|C|841, 6OFX|1|3|U|842, 6OFX|1|3|U|843, 6OFX|1|3|G|844, 6OFX|1|3|A|845
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OFX_088 not in the Motif Atlas
- Geometric match to HL_8C3A_022
- Geometric discrepancy: 0.3655
- The information below is about HL_8C3A_022
- Detailed Annotation
- Externally structured
- Broad Annotation
- Externally structured
- Motif group
- HL_96426.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 4
Unit IDs
6OFX|1|3|C|840
6OFX|1|3|C|841
6OFX|1|3|U|842
6OFX|1|3|U|843
6OFX|1|3|G|844
6OFX|1|3|A|845
6OFX|1|3|G|846
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain W
- 30S ribosomal protein S18
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