HL_6OG7_049

3D structure

PDB id

6OG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GUGAAGAUGC

Length

10 nucleotides

Bulged bases

6OG7|1|1|A|2030, 6OG7|1|1|A|2031, 6OG7|1|1|G|2032

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OG7_049 not in the Motif Atlas

Homologous match to HL_4WF9_047

Geometric discrepancy: 0.1653

The information below is about HL_4WF9_047

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_61996.3

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

7

Unit IDs

6OG7|1|1|G|2027
6OG7|1|1|U|2028
6OG7|1|1|G|2029
6OG7|1|1|A|2030
6OG7|1|1|A|2031
6OG7|1|1|G|2032
6OG7|1|1|A|2033
6OG7|1|1|U|2034
6OG7|1|1|G|2035
6OG7|1|1|C|2036

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain B

50S ribosomal protein L32

Chain c

50S ribosomal protein L3