HL_6OG7_058

3D structure

PDB id

6OG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UGAAUGGAAG

Length

10 nucleotides

Bulged bases

6OG7|1|1|A|2406

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OG7_058 not in the Motif Atlas

Homologous match to HL_7A0S_058

Geometric discrepancy: 0.23

The information below is about HL_7A0S_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_51853.1

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

5

Unit IDs

6OG7|1|1|U|2404
6OG7|1|1|G|2405
6OG7|1|1|A|2406
6OG7|1|1|A|2407
6OG7|1|1|U|2408
6OG7|1|1|G|2409
6OG7|1|1|G|2410
6OG7|1|1|A|2411
6OG7|1|1|A|2412
6OG7|1|1|G|2413

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain l

50S ribosomal protein L15