3D structure

PDB id
6OG7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
CUGUUCG
Length
7 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6OG7_061 not in the Motif Atlas
Homologous match to HL_5J7L_195
Geometric discrepancy: 0.2041
The information below is about HL_5J7L_195
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_30068.2
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
15

Unit IDs

6OG7|1|1|C|2551
6OG7|1|1|U|2552
6OG7|1|1|G|2553
6OG7|1|1|U|2554
6OG7|1|1|U|2555
6OG7|1|1|C|2556
6OG7|1|1|G|2557

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain 8
Peptide chain release factor RF2

Coloring options:


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