HL_6OGG_059

3D structure

PDB id

6OGG (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex with RF2 bound to the UGA codon. Rotated ribosome with RF2 bound (Structure IV).

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

GAGUUCAUAUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OGG|1|1|G|2470
6OGG|1|1|A|2471
6OGG|1|1|G|2472
6OGG|1|1|U|2473
6OGG|1|1|U|2474
6OGG|1|1|C|2475
6OGG|1|1|A|2476
6OGG|1|1|U|2477
6OGG|1|1|A|2478
6OGG|1|1|U|2479
6OGG|1|1|C|2480

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain 8

Peptide chain release factor 2

Chain F

50S ribosomal protein L36

Chain f

50S ribosomal protein L6

Chain m

50S ribosomal protein L16