HL_6OGG_071
3D structure
- PDB id
- 6OGG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S termination complex with RF2 bound to the UGA codon. Rotated ribosome with RF2 bound (Structure IV).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- UUUGAUCAUGG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OGG_071 not in the Motif Atlas
- Homologous match to HL_6CZR_072
- Geometric discrepancy: 0.3346
- The information below is about HL_6CZR_072
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89881.4
- Basepair signature
- cWW-tHW-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
6OGG|1|3|U|12
6OGG|1|3|U|13
6OGG|1|3|U|14
6OGG|1|3|G|15
6OGG|1|3|A|16
6OGG|1|3|U|17
6OGG|1|3|C|18
6OGG|1|3|A|19
6OGG|1|3|U|20
6OGG|1|3|G|21
6OGG|1|3|G|22
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain 4
- mRNA
- Chain J
- 30S ribosomal protein S5
- Chain Q
- 30S ribosomal protein S12
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