HL_6OGG_091
3D structure
- PDB id
- 6OGG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S termination complex with RF2 bound to the UGA codon. Rotated ribosome with RF2 bound (Structure IV).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- GAUGCAACGC
- Length
- 10 nucleotides
- Bulged bases
- 6OGG|1|3|G|966, 6OGG|1|3|G|971
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OGG_091 not in the Motif Atlas
- Geometric match to HL_7RQB_011
- Geometric discrepancy: 0.24
- The information below is about HL_7RQB_011
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_70546.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 18
Unit IDs
6OGG|1|3|G|963
6OGG|1|3|A|964
6OGG|1|3|U|965
6OGG|1|3|G|966
6OGG|1|3|C|967
6OGG|1|3|A|968
6OGG|1|3|A|969
6OGG|1|3|C|970
6OGG|1|3|G|971
6OGG|1|3|C|972
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain 5
- Transfer RNA; tRNA
- Chain 8
- Peptide chain release factor 2
- Chain N
- 30S ribosomal protein S9
- Chain O
- 30S ribosomal protein S10
- Chain R
- 30S ribosomal protein S13
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