3D structure

PDB id
6OGI (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
AGGGGGACCUUCGGGCCUCU
Length
20 nucleotides
Bulged bases
6OGI|1|3|U|209, 6OGI|1|3|C|210
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OGI|1|3|A|199
6OGI|1|3|G|200
6OGI|1|3|G|201
6OGI|1|3|G|202
6OGI|1|3|G|203
6OGI|1|3|G|204
6OGI|1|3|A|205
6OGI|1|3|C|206
6OGI|1|3|C|207
6OGI|1|3|U|208
6OGI|1|3|U|209
6OGI|1|3|C|210
6OGI|1|3|G|211
6OGI|1|3|G|212
6OGI|1|3|G|213
6OGI|1|3|C|214
6OGI|1|3|C|215
6OGI|1|3|U|216
6OGI|1|3|C|217
6OGI|1|3|U|218

Current chains

Chain 3
16S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:

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