HL_6OGI_108

3D structure

PDB id

6OGI (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGUCAUCCCGACU

Length

13 nucleotides

Bulged bases

6OGI|1|1|U|887

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OGI|1|1|G|882
6OGI|1|1|G|883
6OGI|1|1|U|884
6OGI|1|1|C|885
6OGI|1|1|A|886
6OGI|1|1|U|887
6OGI|1|1|C|888
6OGI|1|1|C|889
6OGI|1|1|C|890
6OGI|1|1|G|891
6OGI|1|1|A|892
6OGI|1|1|C|893
6OGI|1|1|U|894

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain X

30S ribosomal protein S19

Chain e

50S ribosomal protein L5